STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_4467PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmy:Pmen_1608 lipoprotein releasing system, ATP-binding protein. (225 aa)    
Predicted Functional Partners:
Cwoe_0223
PFAM: protein of unknown function DUF214; KEGG: gur:Gura_3474 ABC transporter related.
 
 0.979
Cwoe_0583
PFAM: protein of unknown function DUF214; KEGG: gur:Gura_3474 ABC transporter related.
 
 0.976
Cwoe_4859
PFAM: protein of unknown function DUF214; KEGG: mxa:MXAN_6766 ABC transporter, permease protein.
 
 
 0.947
Cwoe_4468
PFAM: protein of unknown function DUF214; KEGG: ade:Adeh_2042 hypothetical protein.
  
 
 0.847
Cwoe_4466
PFAM: ABC transporter related; KEGG: ecg:E2348C_1209 lipoprotein transporter ATP- binding subunit.
 
    
0.838
Cwoe_4465
Hypothetical protein.
       0.778
Cwoe_2001
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_C1161 polar amino acid ABC transporter inner membrane protein.
 
 
  
 0.658
Cwoe_3715
PFAM: protein of unknown function DUF214; KEGG: mxa:MXAN_6766 ABC transporter, permease protein.
 
 
 0.625
Cwoe_2504
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: hch:HCH_06901 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
    
0.603
Cwoe_5118
KEGG: bja:bll2874 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
     
0.586
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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