STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_4511TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: cbd:CBUD_1372 multidrug resistance protein B. (532 aa)    
Predicted Functional Partners:
Cwoe_4512
PFAM: translation initiation factor SUI1; KEGG: pau:PA14_64000 translation initiation factor SUI1.
     
 0.762
Cwoe_4510
Hypothetical protein.
       0.574
Cwoe_2952
PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_1109 major facilitator superfamily MFS_1.
  
  
 0.432
Cwoe_4509
PFAM: glycosyl transferase family 39; KEGG: hypothetical protein.
       0.410
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.