STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_4564Putative transcriptional regulator, Crp/Fnr family; SMART: regulatory protein Crp; KEGG: scl:sce3757 CRP family global nitrogen regulatory protein. (246 aa)    
Predicted Functional Partners:
Cwoe_0602
Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: pol:Bpro_3800 Crp/FNR family transcriptional regulator.
     
  0.900
Cwoe_2918
Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rpb:RPB_0893 Crp/FNR family transcriptional regulator.
     
  0.900
Cwoe_3658
Putative transcriptional regulator, Crp/Fnr family; KEGG: scl:sce0032 CRP family transcriptional regulator.
     
 
0.900
Cwoe_5808
Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: tmz:Tmz1t_1763 transcriptional regulator, Crp/Fnr family.
     
  0.900
Cwoe_4861
KEGG: pcr:Pcryo_0026 hypothetical protein.
   
 0.526
Cwoe_3215
PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; KEGG: bpt:Bpet0240 hypothetical protein.
   
 0.520
Cwoe_2916
Adenylate/guanylate cyclase with Chase sensor; PFAM: CHASE2 domain protein; adenylyl cyclase class- 3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: dma:DMR_17700 putative adenylate cyclase.
  
 0.515
Cwoe_0941
TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: mxa:MXAN_5069 aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 0.504
Cwoe_3914
TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: hypothetical protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 0.504
Cwoe_5211
Adenylate/guanylate cyclase with integral membrane sensor; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase HAMP region domain protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase HAMP region domain protein; KEGG: bba:Bd1116 adenylate cyclase.
  
 0.504
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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