STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_4724PFAM: amine oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: ppd:Ppro_0129 hypothetical protein. (421 aa)    
Predicted Functional Partners:
Cwoe_4722
PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; KEGG: gsu:GSU2329 cyclopropane-fatty-acyl- phospholipid synthase.
  
 0.995
Cwoe_1309
PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: gur:Gura_1633 cyclopropane-fatty-acyl- phospholipid synthase.
  
 0.973
Cwoe_4723
PFAM: protein of unknown function DUF1365; KEGG: mei:Msip34_1300 protein of unknown function DUF1365.
  
 0.960
Cwoe_4029
PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methionine biosynthesis MetW protein; Methyltransferase type 12; KEGG: rso:RS02216 putative cyclopropane-mycolic acid synthase (methyltransferase) protein.
 
  
 0.626
Cwoe_4658
Deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: mpt:Mpe_A0704 deoxyribodipyrimidine photo- lyase type I.
 
   
 0.600
Cwoe_4725
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mxa:MXAN_2034 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.560
Cwoe_1169
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: noc:Noc_1474 ECF sigma factor.
 
  
 0.483
gluQ
Glutamate--tRNA ligase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.
       0.477
Cwoe_4229
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mxa:MXAN_3686 ECF subfamily RNA polymerase sigma factor.
 
  
 0.425
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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