STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_4857Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bte:BTH_II1615 LysR family transcriptional regulator. (307 aa)    
Predicted Functional Partners:
Cwoe_2101
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bur:Bcep18194_A4509 LysR family transcriptional regulator.
  
     0.774
Cwoe_2292
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dma:DMR_07690 LysR family transcriptional regulator.
  
     0.772
Cwoe_5762
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ank:AnaeK_0091 transcriptional regulator, LysR family.
  
     0.772
Cwoe_4856
PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: spl:Spea_1117 C4-dicarboxylate transporter/malic acid transport protein.
 
     0.712
Cwoe_4858
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lch:Lcho_4268 ABC transporter-related protein.
  
    0.511
Cwoe_4859
PFAM: protein of unknown function DUF214; KEGG: mxa:MXAN_6766 ABC transporter, permease protein.
  
  
 0.509
Cwoe_1817
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: mca:MCA2039 glutamate synthase, large subunit.
  
  
 0.499
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.