STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_4906PFAM: thioesterase superfamily protein; KEGG: pmy:Pmen_0382 thioesterase superfamily protein. (142 aa)    
Predicted Functional Partners:
Cwoe_4162
PFAM: Acyl transferase; KEGG: aeh:Mlg_1422 [acyl-carrier-protein] S- malonyltransferase.
  
 
 0.696
Cwoe_4905
Conserved hypothetical protein; KEGG: vap:Vapar_1241 von Willebrand factor type A; TIGRFAM: conserved hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A.
  
    0.620
Cwoe_4904
KEGG: aav:Aave_1062 hypothetical protein.
     
 0.615
Cwoe_4903
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: vap:Vapar_1243 sigma 54 interacting domain protein.
       0.598
Cwoe_4901
HtrA2 peptidase; KEGG: dvl:Dvul_1611 protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein.
  
    0.544
Cwoe_4902
PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: azo:azo2860 hypothetical protein.
  
    0.543
acpP
Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.477
Cwoe_4159
PFAM: phosphopantetheine-binding; KEGG: YALI0D24629p.
  
 
 0.477
Cwoe_5319
KEGG: tgr:Tgr7_2385 hypothetical protein.
  
 
 0.477
secA
Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
   
   0.440
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.