STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_5109PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: lch:Lcho_1215 oxidoreductase domain- containing protein. (340 aa)    
Predicted Functional Partners:
Cwoe_5103
PFAM: amidohydrolase 2; KEGG: cti:RALTA_B0423 putative metal-dependent hydrolase, amidohydrolase 2 family.
 
    0.828
Cwoe_5106
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: mes:Meso_2396 mandelate racemase/muconate lactonizing-like protein.
 
     0.822
Cwoe_5450
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: dac:Daci_0984 myo-inositol catabolism IolB domain-containing protein.
 
  
 0.816
Cwoe_5107
PFAM: amidohydrolase 2; KEGG: vap:Vapar_4401 amidohydrolase 2.
 
    0.814
Cwoe_5104
PFAM: amidohydrolase 2; KEGG: rfr:Rfer_0275 amidohydrolase 2.
 
    0.810
Cwoe_5446
PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rhi:NGR_b04500 putative myo-inositol catabolism protein IolD; Belongs to the TPP enzyme family.
 
  
 0.805
Cwoe_5108
PFAM: Creatininase; KEGG: csa:Csal_1171 creatininase.
  
    0.785
Cwoe_5008
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bbt:BBta_0486 putative myo-inositol catabolism protein.
 
  
 0.781
Cwoe_5102
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: ret:RHE_CH00856 IclR family transcriptional regulator.
  
    0.780
Cwoe_5118
KEGG: bja:bll2874 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
    0.780
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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