STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_5128PFAM: sulfatase; Twin-arginine translocation pathway, signal sequence, subgroup; KEGG: noc:Noc_0194 arylsulfatase A and related enzyme. (540 aa)    
Predicted Functional Partners:
Cwoe_3066
PFAM: protein of unknown function DUF323; KEGG: mxa:MXAN_3662 hypothetical protein.
 
   0.855
Cwoe_2406
PFAM: sulfatase; KEGG: mxa:MXAN_1185 sulfatase family protein.
 
     0.719
Cwoe_5245
Beta-galactosidase; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: sde:Sde_2632 HflK; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.526
Cwoe_5127
PFAM: aminotransferase class-III; KEGG: bbr:BB4409 glutamate-1-semialdehyde aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.524
Cwoe_3831
PFAM: protein of unknown function DUF323; KEGG: bur:Bcep18194_C7515 hypothetical protein.
  
   0.499
Cwoe_3979
PFAM: protein of unknown function DUF608; KEGG: hypothetical protein.
  
  
  0.494
Cwoe_5126
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: rme:Rmet_4271 IclR family transcriptional regulator.
       0.460
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.