STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_5138PFAM: major facilitator superfamily MFS_1; KEGG: vap:Vapar_4413 drug resistance transporter, EmrB/QacA subfamily. (477 aa)    
Predicted Functional Partners:
Cwoe_4784
PFAM: major facilitator superfamily MFS_1; KEGG: bpr:GBP346_A3320 drug resistance MFS transporter.
  
     0.741
Cwoe_5139
PFAM: Cupin 2 conserved barrel domain protein; KEGG: hypothetical protein.
       0.471
Cwoe_4980
PFAM: regulatory protein TetR; KEGG: eca:ECA3449 transcriptional regulator of multidrug resistance genes.
  
     0.441
Cwoe_0468
Hypothetical protein; KEGG: lpn:lpg1627 putative secreted protein.
 
     0.437
Cwoe_5140
PFAM: ANTAR domain protein; KEGG: mca:MCA0588 response regulator NasT.
       0.404
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.