STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_5159PFAM: regulatory protein TetR; KEGG: dma:DMR_40620 TetR family transcriptional regulator. (202 aa)    
Predicted Functional Partners:
Cwoe_5160
TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_1215 EmrB/QacA family drug resistance transporter.
  
    0.542
Cwoe_5161
PFAM: NmrA family protein; KEGG: rlt:Rleg2_5084 NmrA family protein.
       0.540
Cwoe_4782
PFAM: regulatory protein TetR; KEGG: ara:Arad_4588 transcriptional regulator protein.
  
     0.457
Cwoe_0757
PFAM: regulatory protein TetR; KEGG: oan:Oant_2708 transcriptional regulator BetI.
  
     0.436
Cwoe_0870
PFAM: regulatory protein TetR; KEGG: rlt:Rleg2_2156 transcriptional regulator, TetR family.
  
     0.421
Cwoe_3849
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: atc:AGR_pAT_729 hypothetical protein.
  
     0.420
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.