STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_5312KEGG: bbt:BBta_5467 hypothetical protein. (374 aa)    
Predicted Functional Partners:
Cwoe_5313
KEGG: ank:AnaeK_2729 cellulose biosynthesis (CelD)- like protein.
 
     0.921
Cwoe_5311
PFAM: glycosyl transferase group 1; KEGG: ank:AnaeK_4220 glycosyl transferase group 1.
       0.667
Cwoe_5310
KEGG: hypothetical protein LOC765669.
       0.454
Cwoe_0030
PFAM: glycosyl transferase family 2; Tetratricopeptide TPR_4; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; KEGG: acp:A2cp1_2617 glycosyl transferase family 2.
 
   
 0.445
Cwoe_3290
PFAM: Rare lipoprotein A; KEGG: rpb:RPB_0269 rare lipoprotein A.
  
     0.419
Cwoe_5307
PFAM: glycosyl transferase family 2; KEGG: dma:DMR_40310 putative glycosyltransferase.
       0.402
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.