STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_5333Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Tetratricopeptide TPR_4; SMART: regulatory protein LuxR; KEGG: rlt:Rleg2_5436 transcriptional regulator, LuxR family. (992 aa)    
Predicted Functional Partners:
Cwoe_2467
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Tetratricopeptide TPR_4; SMART: regulatory protein LuxR; KEGG: pol:Bpro_3193 LuxR family transcriptional regulator.
 
     0.688
Cwoe_4164
Putative signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; SMART: GAF domain protein; KEGG: bpt:Bpet4996 nitrate/nitrite sensor protein.
  
     0.557
Cwoe_5332
PFAM: glycosyl transferase family 2; KEGG: dol:Dole_2860 putative glucosyl-3- phosphoglycerate synthase.
       0.538
Cwoe_5541
PFAM: beta-lactamase domain protein; KEGG: azo:azo2977 putative beta lactamase precursor.
  
     0.532
Cwoe_3536
PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl01_1842 major facilitator transporter.
  
     0.509
Cwoe_4558
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Tetratricopeptide TPR_4; SMART: regulatory protein LuxR; KEGG: vap:Vapar_3549 transcriptional regulator, LuxR family.
 
 
 
0.488
Cwoe_0554
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: vap:Vapar_3549 transcriptional regulator, LuxR family.
 
 
 
0.486
Cwoe_5334
PFAM: Methyltransferase type 11; KEGG: mmb:Mmol_0917 methyltransferase type 11.
       0.485
Cwoe_4443
KEGG: pfl:PFL_4098 transporter, putative.
  
     0.479
Cwoe_5335
Hypothetical protein; KEGG: azo:azo2702 glycosyltransferase.
       0.478
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.