STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_5391KEGG: scl:sce6114 hypothetical protein. (155 aa)    
Predicted Functional Partners:
Cwoe_5389
Putative exporter of polyketide antibiotics- like protein; KEGG: acp:A2cp1_2916 PBS lyase heat domain protein repeat-containing protein.
 
     0.778
Cwoe_0543
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: atc:AGR_pAT_269 hypothetical protein.
  
   
 0.690
Cwoe_5390
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pap:PSPA7_1736 NosF protein.
 
     0.682
Cwoe_0303
PFAM: protein of unknown function DUF214; KEGG: hha:Hhal_1416 hypothetical protein.
  
     0.674
Cwoe_2931
Hypothetical protein; KEGG: GF21871 gene product from transcript GF21871- RA.
  
     0.665
Cwoe_1187
KEGG: saz:Sama_0820 putative lipoprotein.
 
     0.614
Cwoe_1119
PFAM: lipolytic protein G-D-S-L family; KEGG: GF21871 gene product from transcript GF21871- RA.
  
     0.613
Cwoe_1542
Triacylglycerol lipase; KEGG: Fibronectin type III domain protein.
  
     0.613
Cwoe_4974
Triacylglycerol lipase; KEGG: Fibronectin type III domain protein.
  
     0.578
Cwoe_0208
PFAM: regulatory protein TetR; KEGG: bja:bll2216 transcriptional regulatory protein.
  
    0.559
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.