STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_5444Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; regulatory protein GntR HTH; SMART: regulatory protein DeoR; KEGG: pay:PAU_00772 putative aga operon transcriptional repressor of sugar metabolism. (248 aa)    
Predicted Functional Partners:
Cwoe_5442
PFAM: PfkB domain protein; KEGG: bte:BTH_I2471 ribokinase; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.800
Cwoe_5443
PFAM: glycoside hydrolase family 4; KEGG: xac:XAC3081 6-phospho-beta-glucosidase.
  
    0.790
Cwoe_5797
PFAM: PfkB domain protein; KEGG: bmn:BMA10247_A0142 6-phosphofructokinase.
 
  
 0.783
Cwoe_5441
PFAM: extracellular solute-binding protein family 1; KEGG: rec:RHECIAT_CH0001624 putative sugar ABC transporter, substrate-binding protein.
  
    0.780
Cwoe_5437
Glutamine--fructose-6-phosphate transaminase (isomerizing); PFAM: sugar isomerase (SIS); KEGG: mlo:mll4767 glucosamine-fructose-6-phosphate aminotransferase.
  
  
 0.777
Cwoe_1873
TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: mxa:MXAN_2372 6-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.771
Cwoe_5439
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rlg:Rleg_1308 binding-protein-dependent transport systems inner membrane component.
     
 0.764
Cwoe_5440
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_CH0001625 putative sugar ABC transporter, permease protein.
     
 0.763
Cwoe_5438
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mlo:mll0849 ATP-binding protein of sugar ABC transporter; Belongs to the ABC transporter superfamily.
  
  
 0.756
Cwoe_5450
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: dac:Daci_0984 myo-inositol catabolism IolB domain-containing protein.
  
  
 0.593
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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