STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_5452Hypothetical protein. (269 aa)    
Predicted Functional Partners:
Cwoe_5453
Hypothetical protein.
      
0.773
Cwoe_5449
PFAM: PfkB domain protein; KEGG: rhi:NGR_c25980 myo-inositol catabolism IolC.
       0.631
Cwoe_5450
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: dac:Daci_0984 myo-inositol catabolism IolB domain-containing protein.
       0.631
Cwoe_5451
TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: ade:Adeh_2245 methylmalonate-semialdehyde dehydrogenase [acylating].
       0.631
Cwoe_5446
PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rhi:NGR_b04500 putative myo-inositol catabolism protein IolD; Belongs to the TPP enzyme family.
       0.453
Cwoe_5447
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: smd:Smed_1258 alcohol dehydrogenase.
       0.453
Cwoe_5448
Myo-inosose-2 dehydratase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rhi:NGR_b04470 putative sugar phosphate isomerase/epimerase IoIE.
       0.453
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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