STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_5478TIGRFAM: methyltransferase FkbM family; KEGG: tgr:Tgr7_2105 hypothetical protein. (258 aa)    
Predicted Functional Partners:
Cwoe_5477
PFAM: ABC-2 type transporter; KEGG: aap:NT05HA_0630 ABC transporter integral membrane subunit.
 
     0.816
Cwoe_5476
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pst:PSPTO_1075 O-antigen ABC transporter, ATP- binding protein, putative.
 
     0.815
Cwoe_5479
PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: mxa:MXAN_4616 glycosyl transferase family protein.
  
  
 0.802
Cwoe_5480
KEGG: hypothetical protein.
       0.773
Cwoe_5481
KEGG: kpu:KP1_0662 hypothetical protein.
 
   
 0.669
Cwoe_5482
KEGG: kpu:KP1_0662 hypothetical protein.
     
 0.651
Cwoe_5475
PFAM: cytochrome oxidase assembly; KEGG: bph:Bphy_0285 cytochrome oxidase assembly.
       0.538
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.