STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_5486PFAM: glycosyl transferase group 1; KEGG: smd:Smed_4803 glycosyl transferase group 1. (398 aa)    
Predicted Functional Partners:
Cwoe_5485
PFAM: glycosyl transferase group 1; KEGG: bmj:BMULJ_00727 hypothetical protein.
 
     0.792
Cwoe_5484
Hypothetical protein; KEGG: bxe:Bxe_B0776 putative membrane glycoprotein.
       0.749
Cwoe_5483
Hypothetical protein.
  
  
 0.582
Cwoe_1896
PFAM: glycosyl transferase group 1; KEGG: dps:DP0309 hexosyltransferase.
  
     0.574
Cwoe_5516
KEGG: ank:AnaeK_2858 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
 
  
 0.569
Cwoe_5296
KEGG: ade:Adeh_2766 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.508
Cwoe_5787
TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; KEGG: maq:Maqu_2629 glucose-1-phosphate thymidylyltransferase.
 
  
 0.498
Cwoe_2584
Hypothetical protein; KEGG: mxa:MXAN_5598 OmpA domain-containing protein.
  
     0.494
Cwoe_3157
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.494
Cwoe_0979
PFAM: O-antigen polymerase; KEGG: mxa:MXAN_1052 O-antigen polymerase family protein.
 
  
 0.476
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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