STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_5518Ferritin Dps family protein; Iron-storage protein. (177 aa)    
Predicted Functional Partners:
Cwoe_4488
PFAM: Ferritin Dps family protein; Rubrerythrin; KEGG: vap:Vapar_4114 ferritin Dps family protein.
    
 0.911
Cwoe_5519
Transcriptional activator, TenA family; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4- amino-5-aminomethyl-2-methylpyrimidine to 4-amino-5-hydroxymethyl-2- methylpyrimidine (HMP); Belongs to the TenA family.
       0.782
Cwoe_3637
Peroxidase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; Redoxin domain protein; KEGG: bra:BRADO3235 thioredoxin peroxidase (AhpC, alkyl hydroperoxide reductase).
  
  
 0.681
Cwoe_4172
PFAM: iron dependent repressor; FeoA family protein; SMART: iron dependent repressor; KEGG: tcx:Tcr_0904 iron dependent repressor.
 
   
 0.572
Cwoe_5517
PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: afw:Anae109_1900 NAD-dependent epimerase/dehydratase.
  
    0.561
rpsP
TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: ppd:Ppro_1098 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
  
    0.546
Cwoe_5520
Hypothetical protein.
       0.517
Cwoe_5521
Hypothetical protein.
       0.517
Cwoe_1559
PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: sun:SUN_1757 rubredoxin.
  
  
 0.510
Cwoe_5738
PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: abo:ABO_2708 rubredoxin; Belongs to the rubredoxin family.
  
  
 0.510
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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