STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_5661PFAM: fatty acid desaturase; KEGG: maq:Maqu_3070 fatty acid desaturase. (378 aa)    
Predicted Functional Partners:
Cwoe_5662
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; FAD- binding 9 siderophore-interacting domain protein; ferredoxin; KEGG: abo:ABO_1717 flavodoxin reductases (ferredoxin-NADPH reductase)putative.
 
 0.998
Cwoe_1401
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: abo:ABO_1717 flavodoxin reductases (ferredoxin-NADPH reductase)putative.
 
 0.988
Cwoe_4186
Stearoyl-CoA 9-desaturase; PFAM: fatty acid desaturase; KEGG: pol:Bpro_5328 delta-9 acyl-phospholipid desaturase.
  
 0.919
Cwoe_4990
Stearoyl-CoA 9-desaturase; PFAM: fatty acid desaturase; KEGG: pol:Bpro_5328 delta-9 acyl-phospholipid desaturase.
  
 0.919
Cwoe_1400
PFAM: fatty acid desaturase; KEGG: hch:HCH_03837 fatty acid desaturase.
  
  
 
0.903
Cwoe_5663
PFAM: regulatory protein TetR; KEGG: abo:ABO_1718 TetR family transcriptional regulator.
 
    0.843
Cwoe_0892
KEGG: smt:Smal_3065 hypothetical protein.
  
  
 0.722
Cwoe_5739
Alkane 1-monooxygenase; PFAM: fatty acid desaturase; KEGG: bch:Bcen2424_0980 alkane 1-monooxygenase.
  
     0.650
Cwoe_0199
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: aci:ACIAD1412 putative acyl-CoA dehydrogenase.
  
   
 0.586
Cwoe_0196
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rpf:Rpic12D_0431 short-chain dehydrogenase/reductase SDR.
  
 
 
 0.573
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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