STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_5685TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: dal:Dalk_0072 conserved repeat domain protein. (471 aa)    
Predicted Functional Partners:
Cwoe_5686
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: ank:AnaeK_4153 MaoC domain protein dehydratase.
 
     0.818
Cwoe_0341
KEGG: tbd:Tbd_0735 hypothetical protein.
  
     0.677
Cwoe_4678
KEGG: tbd:Tbd_0735 hypothetical protein.
  
     0.486
Cwoe_5559
Phage shock protein C, PspC; PFAM: PspC domain protein; KEGG: afw:Anae109_3790 phage shock protein C, PspC.
  
     0.467
Cwoe_4785
PFAM: SMP-30/Gluconolaconase/LRE domain protein; NHL repeat containing protein; KEGG: vei:Veis_3590 SMP-30/gluconolaconase/LRE domain-containing protein.
  
     0.449
Cwoe_4217
KEGG: bba:Bd2872 hypothetical protein.
 
 
 0.429
Cwoe_3241
PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: dvm:DvMF_0371 cell divisionFtsK/SpoIIIE.
   
 
 0.400
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.