STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_5720PFAM: protein of unknown function DUF403; KEGG: tgr:Tgr7_1013 protein of unknown function DUF403. (322 aa)    
Predicted Functional Partners:
Cwoe_5719
PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: aeh:Mlg_0775 hypothetical protein.
  
 0.994
Cwoe_5721
PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: bmn:BMA10247_A2035 transglutaminase domain- containing protein.
 
  
 0.985
Cwoe_5717
KEGG: aeh:Mlg_2715 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.559
Cwoe_5718
PFAM: ABC-2 type transporter; KEGG: mes:Meso_2100 ABC-2 type transporter.
       0.559
Cwoe_3214
PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: aav:Aave_2161 transglutaminase domain- containing protein.
 
  
 0.455
Cwoe_5716
Transcriptional regulator, TetR family; PFAM: Tetracyclin repressor domain protein; regulatory protein TetR; KEGG: scl:sce6697 putative transcriptional regulator.
       0.412
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.