STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_5737PFAM: regulatory protein TetR; KEGG: dat:HRM2_43050 HTH-type transcriptional regulator (TetR family protein). (203 aa)    
Predicted Functional Partners:
Cwoe_5739
Alkane 1-monooxygenase; PFAM: fatty acid desaturase; KEGG: bch:Bcen2424_0980 alkane 1-monooxygenase.
 
    0.892
Cwoe_4184
Adenylate/guanylate cyclase with integral membrane sensor; PFAM: histidine kinase HAMP region domain protein; adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase HAMP region domain protein; KEGG: bba:Bd1116 adenylate cyclase.
  
     0.717
Cwoe_5406
PFAM: Protein of unknown function DUF2236; KEGG: bja:blr2777 hypothetical protein.
  
     0.715
Cwoe_5786
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: bja:blr4240 hypothetical protein.
  
     0.702
Cwoe_5414
PFAM: regulatory protein TetR; KEGG: bbt:BBta_5351 TetR family transcriptional regulator.
  
     0.690
Cwoe_3120
PFAM: Carboxymuconolactone decarboxylase; KEGG: dol:Dole_1053 carboxymuconolactone decarboxylase.
 
     0.687
Cwoe_5278
PFAM: Polyketide cyclase/dehydrase; Activator of Hsp90 ATPase 1 family protein; KEGG: pau:PA14_37130 hypothetical protein.
  
     0.680
Cwoe_5738
PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: abo:ABO_2708 rubredoxin; Belongs to the rubredoxin family.
       0.661
Cwoe_3121
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bac:BamMC406_1201 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.656
Cwoe_5417
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bac:BamMC406_6159 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.601
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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