STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cwoe_5784KEGG: gur:Gura_2929 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; nucleic acid binding OB-fold tRNA/helicase-type; SMART: metal-dependent phosphohydrolase HD region. (327 aa)    
Predicted Functional Partners:
Cwoe_5785
KEGG: ank:AnaeK_0616 transcriptional regulator-like protein.
 
     0.664
Cwoe_5783
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: reh:H16_B2496 3-oxoacyl-[acyl-carrier protein] reductase.
       0.579
Cwoe_5368
TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3- phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: gme:Gmet_1952 CDP-diacylglycerol--glycerol-3- phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.534
Cwoe_5786
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: bja:blr4240 hypothetical protein.
       0.490
rny
Metal dependent phosphohydrolase; Endoribonuclease that initiates mRNA decay.
     
 0.459
Cwoe_1764
PFAM: Rhomboid family protein; KEGG: nmu:Nmul_A2462 rhomboid-like protein.
  
     0.456
Cwoe_3603
Transcriptional regulator, LuxR family; KEGG: dvm:DvMF_3011 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: Metal-dependent hydrolase HDOD; regulatory protein LuxR; metal-dependent phosphohydrolase HD sub domain; SMART: regulatory protein LuxR.
 
     0.415
Your Current Organism:
Conexibacter woesei DSM 14684
NCBI taxonomy Id: 469383
Other names: C. woesei DSM 14684, Conexibacter woesei str. DSM 14684, Conexibacter woesei strain DSM 14684
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.