STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ47396.1Hypothetical protein. (907 aa)    
Predicted Functional Partners:
EHQ47072.1
30S ribosomal protein S2.
  
 0.961
EHQ47270.1
Ribosomal protein S4.
  
 0.959
EHQ44788.1
30S ribosomal protein S3.
   
 0.959
EHQ44768.1
30S ribosomal protein S11.
  
 0.958
EHQ44777.1
30S ribosomal protein S5.
   
 0.958
EHQ44790.1
30S ribosomal protein S19.
   
 0.958
EHQ47059.1
Hypothetical protein.
  
 0.957
EHQ45613.1
30S ribosomal protein S7.
   
 0.957
EHQ44793.1
50S ribosomal protein L4.
  
 0.957
EHQ44785.1
30S ribosomal protein S17.
   
 0.956
Your Current Organism:
Coprobacillus sp. 8254BFAA
NCBI taxonomy Id: 469597
Other names: C. sp. 8_2_54BFAA, Coprobacillus sp. 8_2_54BFAA
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