STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ47408.1Hypothetical protein. (818 aa)    
Predicted Functional Partners:
EHQ47409.1
Hypothetical protein.
 
     0.951
EHQ47410.1
Hypothetical protein.
  
  
 0.815
EHQ47417.1
Hypothetical protein.
 
  
 0.809
EHQ47407.1
Hypothetical protein.
       0.796
EHQ47405.1
Hypothetical protein.
       0.795
EHQ47406.1
Hypothetical protein.
       0.786
EHQ47404.1
Hypothetical protein.
       0.773
EHQ47411.1
Hypothetical protein.
       0.773
EHQ47563.1
Hypothetical protein.
 
  
 0.768
EHQ48140.1
Hypothetical protein.
 
  
 0.765
Your Current Organism:
Coprobacillus sp. 8254BFAA
NCBI taxonomy Id: 469597
Other names: C. sp. 8_2_54BFAA, Coprobacillus sp. 8_2_54BFAA
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.