STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ48098.1Hypothetical protein. (453 aa)    
Predicted Functional Partners:
EHQ48099.1
TrkH family potassium uptake protein.
 
 
 0.993
EHQ48096.1
TrkH family potassium uptake protein.
  
 
 0.901
EHQ48044.1
TrkH family potassium uptake protein.
  
 
 0.848
EHQ47759.1
NAD+ synthetase.
  
 
  0.764
EHQ46894.1
Competence/damage-inducible protein CinA domain.
    
 0.745
EHQ45114.1
Competence/damage-inducible protein CinA domain.
    
 0.745
EHQ46444.1
Ribosomal RNA small subunit methyltransferase B.
  
   0.675
EHQ48100.1
Putative dGTPase.
       0.647
EHQ46997.1
Nicotinate (nicotinamide) nucleotide adenylyltransferase.
  
 
 0.624
EHQ45807.1
uroporphyrinogen-III C-methyltransferase.
  
    0.619
Your Current Organism:
Coprobacillus sp. 8254BFAA
NCBI taxonomy Id: 469597
Other names: C. sp. 8_2_54BFAA, Coprobacillus sp. 8_2_54BFAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.