STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ48128.1Hypothetical protein. (203 aa)    
Predicted Functional Partners:
EHQ44807.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 0.919
EHQ44758.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.850
EHQ45157.1
Pyruvate kinase.
  
 0.820
EHQ47167.1
Hypothetical protein.
   
 
 0.804
EHQ47134.1
Hypothetical protein.
   
 0.797
EHQ45607.1
DNA-directed RNA polymerase, beta subunit.
    
 
 0.789
EHQ45608.1
DNA-directed RNA polymerase, beta' subunit.
    
 
 0.789
EHQ47719.1
Hypothetical protein.
    
 0.784
EHQ47976.1
RNA polymerase sigma factor rpoD.
    
 
 0.783
EHQ44767.1
DNA-directed RNA polymerase, alpha subunit.
    
 
 0.776
Your Current Organism:
Coprobacillus sp. 8254BFAA
NCBI taxonomy Id: 469597
Other names: C. sp. 8_2_54BFAA, Coprobacillus sp. 8_2_54BFAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.