STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ47051.1Pseudouridine synthase. (239 aa)    
Predicted Functional Partners:
EHQ45214.1
Ribosome-associated GTPase EngA.
 
  
 0.820
EHQ47052.1
Hypothetical protein.
       0.796
EHQ47050.1
tRNA (guanine-N(7)-)-methyltransferase.
  
  
 0.754
EHQ45215.1
Cytidylate kinase.
 
  
 0.746
EHQ47048.1
Hypothetical protein.
     
 0.717
EHQ47049.1
Hypothetical protein.
       0.704
EHQ44980.1
Exodeoxyribonuclease III (xth).
  
    0.657
EHQ48110.1
Segregation and condensation protein B.
  
  
 0.656
EHQ47047.1
Hypothetical protein.
       0.653
EHQ47046.1
Holo-[acyl-carrier-protein] synthase.
       0.650
Your Current Organism:
Coprobacillus sp. 8254BFAA
NCBI taxonomy Id: 469597
Other names: C. sp. 8_2_54BFAA, Coprobacillus sp. 8_2_54BFAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.