STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ46562.1Hypothetical protein. (261 aa)    
Predicted Functional Partners:
EHQ47889.1
Hypothetical protein.
 
0.951
EHQ46563.1
Amidophosphoribosyltransferase.
    
 0.873
EHQ45914.1
Hypothetical protein.
  
 0.858
EHQ44807.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 0.853
EHQ44767.1
DNA-directed RNA polymerase, alpha subunit.
 
 
 
 0.806
EHQ44964.1
Chorismate mutase.
  
 
 0.803
EHQ47976.1
RNA polymerase sigma factor rpoD.
   
 
 0.800
EHQ46743.1
Hypothetical protein.
 
 
 0.794
EHQ46064.1
Hypothetical protein.
 
 
 0.784
EHQ47448.1
Hypothetical protein.
 
0.765
Your Current Organism:
Coprobacillus sp. 8254BFAA
NCBI taxonomy Id: 469597
Other names: C. sp. 8_2_54BFAA, Coprobacillus sp. 8_2_54BFAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.