Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHQ45983.1Hypothetical protein. (116 aa)    
Predicted Functional Partners:
EHQ45984.1
Hypothetical protein.
     0.952
EHQ45164.1
Hypothetical protein.
 
 0.780
EHQ46053.1
Hypothetical protein.
  
     0.762
EHQ45095.1
Hypothetical protein.
  
 
 0.731
EHQ45900.1
Hypothetical protein.
  
 
 0.646
EHQ45437.1
lysine-tRNA ligase.
  
    0.643
EHQ44664.1
Hypothetical protein.
  
 
 0.625
EHQ46359.1
Hypothetical protein.
  
 
 0.620
EHQ46606.1
Chlorophyll synthesis pathway, bchC.
  
 
 0.609
EHQ45165.1
Hypothetical protein.
 
 
 0.608
Your Current Organism:
Coprobacillus sp. 8254BFAA
NCBI taxonomy Id: 469597
Other names: C. sp. 8_2_54BFAA, Coprobacillus sp. 8_2_54BFAA
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