STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ45852.1S-adenosylmethionine decarboxylase proenzyme. (261 aa)    
Predicted Functional Partners:
EHQ45850.1
Spermidine synthase.
 
 
 0.998
EHQ45847.1
Carboxynorspermidine decarboxylase.
    
 0.934
EHQ45849.1
Agmatinase.
    
 0.934
EHQ45851.1
Hypothetical protein.
 
   
 0.847
EHQ45848.1
Hypothetical protein.
       0.794
EHQ47759.1
NAD+ synthetase.
  
 
 0.774
EHQ47289.1
Methionine adenosyltransferase.
    
 0.771
EHQ46128.1
Purine nucleoside phosphorylase I, inosine and guanosine-specific.
    
 0.754
EHQ45644.1
Hypothetical protein.
     
 0.750
EHQ47000.1
MTA/SAH nucleosidase.
    
 0.742
Your Current Organism:
Coprobacillus sp. 8254BFAA
NCBI taxonomy Id: 469597
Other names: C. sp. 8_2_54BFAA, Coprobacillus sp. 8_2_54BFAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.