Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHQ44807.1 | EHQ45011.1 | HMPREF0978_03447 | HMPREF0978_03225 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.777 |
EHQ44807.1 | EHQ45302.1 | HMPREF0978_03447 | HMPREF0978_02648 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.777 |
EHQ44807.1 | EHQ45303.1 | HMPREF0978_03447 | HMPREF0978_02649 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.777 |
EHQ44807.1 | EHQ45304.1 | HMPREF0978_03447 | HMPREF0978_02650 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | PTS system, glucose subfamily, IIA component. | 0.611 |
EHQ44807.1 | EHQ45313.1 | HMPREF0978_03447 | HMPREF0978_02659 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.777 |
EHQ44807.1 | EHQ47458.1 | HMPREF0978_03447 | HMPREF0978_00164 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | PTS system, glucose subfamily, IIA component. | 0.611 |
EHQ44807.1 | EHQ47460.1 | HMPREF0978_03447 | HMPREF0978_00166 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.611 |
EHQ44807.1 | EHQ47746.1 | HMPREF0978_03447 | HMPREF0978_00452 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | PTS system, glucose-like IIB component. | 0.611 |
EHQ44807.1 | EHQ47749.1 | HMPREF0978_03447 | HMPREF0978_00455 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | PTS system, glucose subfamily, IIA component. | 0.611 |
EHQ44807.1 | EHQ47859.1 | HMPREF0978_03447 | HMPREF0978_00565 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | PTS system, sucrose-specific IIBC component. | 0.611 |
EHQ45011.1 | EHQ44807.1 | HMPREF0978_03225 | HMPREF0978_03447 | Hypothetical protein. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.777 |
EHQ45011.1 | EHQ45302.1 | HMPREF0978_03225 | HMPREF0978_02648 | Hypothetical protein. | Hypothetical protein. | 0.751 |
EHQ45011.1 | EHQ45303.1 | HMPREF0978_03225 | HMPREF0978_02649 | Hypothetical protein. | Hypothetical protein. | 0.766 |
EHQ45011.1 | EHQ45304.1 | HMPREF0978_03225 | HMPREF0978_02650 | Hypothetical protein. | PTS system, glucose subfamily, IIA component. | 0.725 |
EHQ45011.1 | EHQ45313.1 | HMPREF0978_03225 | HMPREF0978_02659 | Hypothetical protein. | Hypothetical protein. | 0.741 |
EHQ45011.1 | EHQ47458.1 | HMPREF0978_03225 | HMPREF0978_00164 | Hypothetical protein. | PTS system, glucose subfamily, IIA component. | 0.725 |
EHQ45011.1 | EHQ47460.1 | HMPREF0978_03225 | HMPREF0978_00166 | Hypothetical protein. | Hypothetical protein. | 0.725 |
EHQ45011.1 | EHQ47746.1 | HMPREF0978_03225 | HMPREF0978_00452 | Hypothetical protein. | PTS system, glucose-like IIB component. | 0.725 |
EHQ45011.1 | EHQ47749.1 | HMPREF0978_03225 | HMPREF0978_00455 | Hypothetical protein. | PTS system, glucose subfamily, IIA component. | 0.725 |
EHQ45011.1 | EHQ47859.1 | HMPREF0978_03225 | HMPREF0978_00565 | Hypothetical protein. | PTS system, sucrose-specific IIBC component. | 0.725 |
page 1 of 6