STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ44746.1Hypothetical protein. (170 aa)    
Predicted Functional Partners:
EHQ45600.1
Desulfoferrodoxin.
 
  
 0.832
EHQ48213.1
Hypothetical protein.
  
  
 0.764
EHQ45149.1
Hypothetical protein.
  
  
 0.764
EHQ46589.1
Hypothetical protein.
    
 
 0.728
EHQ45170.1
Peroxiredoxin.
  
  
 0.692
EHQ47084.1
30S ribosomal protein S16.
  
    0.615
EHQ44745.1
Hypothetical protein.
       0.568
EHQ46111.1
Glyceraldehyde-3-phosphate dehydrogenase, type I.
  
  
 0.504
EHQ45171.1
Putative alkyl hydroperoxide reductase F subunit.
     
 0.451
EHQ46716.1
Hypothetical protein.
  
    0.440
Your Current Organism:
Coprobacillus sp. 8254BFAA
NCBI taxonomy Id: 469597
Other names: C. sp. 8_2_54BFAA, Coprobacillus sp. 8_2_54BFAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.