Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEU32293.1uracil-DNA glycosylase, family 4. (195 aa)    
Predicted Functional Partners:
EEU32292.1
Hypothetical protein.
       0.808
EEU32294.1
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
       0.777
EEU32291.1
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.764
EEU32295.1
KpsF/GutQ family sugar isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
       0.702
EEU32296.1
Hypothetical protein.
       0.691
EEU32829.1
Hypothetical protein.
  
     0.627
EEU31813.1
Hypothetical protein.
  
     0.565
EEU31378.1
Hypothetical protein.
  
     0.558
EEU31292.1
Hypothetical protein.
  
     0.510
EEU31719.1
Hypothetical protein.
  
     0.497
Your Current Organism:
Fusobacterium nucleatum vincentii
NCBI taxonomy Id: 469604
Other names: F. nucleatum subsp. vincentii 3_1_36A2, Fusobacterium nucleatum subsp. vincentii 3_1_36A2, Fusobacterium sp. 3_1_36A2
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