Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEU32307.1 | EEU32308.1 | HMPREF0946_00380 | HMPREF0946_00381 | Hypothetical protein; Belongs to the methyltransferase superfamily. | Hypothetical protein. | 0.814 |
EEU32307.1 | EEU32309.1 | HMPREF0946_00380 | HMPREF0946_00382 | Hypothetical protein; Belongs to the methyltransferase superfamily. | UPF0758 protein; Belongs to the UPF0758 family. | 0.762 |
EEU32307.1 | EEU32311.1 | HMPREF0946_00380 | HMPREF0946_00384 | Hypothetical protein; Belongs to the methyltransferase superfamily. | Hypothetical protein; Belongs to the phosphoglycerate mutase family. | 0.726 |
EEU32307.1 | EEU32313.1 | HMPREF0946_00380 | HMPREF0946_00386 | Hypothetical protein; Belongs to the methyltransferase superfamily. | Hypothetical protein. | 0.711 |
EEU32307.1 | cobS | HMPREF0946_00380 | HMPREF0946_00385 | Hypothetical protein; Belongs to the methyltransferase superfamily. | Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.726 |
EEU32307.1 | cobT | HMPREF0946_00380 | HMPREF0946_00383 | Hypothetical protein; Belongs to the methyltransferase superfamily. | Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.752 |
EEU32308.1 | EEU32307.1 | HMPREF0946_00381 | HMPREF0946_00380 | Hypothetical protein. | Hypothetical protein; Belongs to the methyltransferase superfamily. | 0.814 |
EEU32308.1 | EEU32309.1 | HMPREF0946_00381 | HMPREF0946_00382 | Hypothetical protein. | UPF0758 protein; Belongs to the UPF0758 family. | 0.779 |
EEU32308.1 | EEU32311.1 | HMPREF0946_00381 | HMPREF0946_00384 | Hypothetical protein. | Hypothetical protein; Belongs to the phosphoglycerate mutase family. | 0.731 |
EEU32308.1 | EEU32313.1 | HMPREF0946_00381 | HMPREF0946_00386 | Hypothetical protein. | Hypothetical protein. | 0.725 |
EEU32308.1 | cobS | HMPREF0946_00381 | HMPREF0946_00385 | Hypothetical protein. | Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.741 |
EEU32308.1 | cobT | HMPREF0946_00381 | HMPREF0946_00383 | Hypothetical protein. | Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.752 |
EEU32309.1 | EEU32307.1 | HMPREF0946_00382 | HMPREF0946_00380 | UPF0758 protein; Belongs to the UPF0758 family. | Hypothetical protein; Belongs to the methyltransferase superfamily. | 0.762 |
EEU32309.1 | EEU32308.1 | HMPREF0946_00382 | HMPREF0946_00381 | UPF0758 protein; Belongs to the UPF0758 family. | Hypothetical protein. | 0.779 |
EEU32309.1 | EEU32311.1 | HMPREF0946_00382 | HMPREF0946_00384 | UPF0758 protein; Belongs to the UPF0758 family. | Hypothetical protein; Belongs to the phosphoglycerate mutase family. | 0.749 |
EEU32309.1 | EEU32313.1 | HMPREF0946_00382 | HMPREF0946_00386 | UPF0758 protein; Belongs to the UPF0758 family. | Hypothetical protein. | 0.731 |
EEU32309.1 | cobS | HMPREF0946_00382 | HMPREF0946_00385 | UPF0758 protein; Belongs to the UPF0758 family. | Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.749 |
EEU32309.1 | cobT | HMPREF0946_00382 | HMPREF0946_00383 | UPF0758 protein; Belongs to the UPF0758 family. | Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.776 |
EEU32311.1 | EEU32307.1 | HMPREF0946_00384 | HMPREF0946_00380 | Hypothetical protein; Belongs to the phosphoglycerate mutase family. | Hypothetical protein; Belongs to the methyltransferase superfamily. | 0.726 |
EEU32311.1 | EEU32308.1 | HMPREF0946_00384 | HMPREF0946_00381 | Hypothetical protein; Belongs to the phosphoglycerate mutase family. | Hypothetical protein. | 0.731 |
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