Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEU32328.1RfaE, domain II; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. (154 aa)    
Predicted Functional Partners:
EEU31244.1
RfaE, domain I.
 
   
 0.979
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily.
   
 0.967
hldD
ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.
 
 
 0.952
EEU32327.1
YjeE family ATPase.
  
    0.800
EEU32326.1
Universal bacterial protein YeaZ.
       0.798
EEU32329.2
Hypothetical protein.
       0.787
EEU32019.1
Lipopolysaccharide heptosyltransferase II.
 
   
 0.769
EEU32017.1
Hypothetical protein.
 
   
 0.762
EEU31609.1
YrbI family 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase.
 
 
    0.744
EEU32385.1
Hypothetical protein.
 
   
 0.599
Your Current Organism:
Fusobacterium nucleatum vincentii
NCBI taxonomy Id: 469604
Other names: F. nucleatum subsp. vincentii 3_1_36A2, Fusobacterium nucleatum subsp. vincentii 3_1_36A2, Fusobacterium sp. 3_1_36A2
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