Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEU32632.1Hypothetical protein. (228 aa)    
Predicted Functional Partners:
EEU32631.2
FTR1 family protein.
 
  
 0.956
EEU31340.1
Hypothetical protein.
 
   
 0.811
EEU31336.1
Hypothetical protein.
 
 
   0.810
EEU31338.1
Hypothetical protein.
 
     0.777
EEU31339.1
Hypothetical protein.
 
     0.777
EEU31334.1
Hypothetical protein.
 
     0.775
EEU31337.1
Hypothetical protein.
 
     0.738
EEU31333.1
Hypothetical protein.
 
     0.558
AGU16126.1
Hypothetical protein.
  
     0.439
AGU16130.1
Hypothetical protein.
  
     0.418
Your Current Organism:
Fusobacterium nucleatum vincentii
NCBI taxonomy Id: 469604
Other names: F. nucleatum subsp. vincentii 3_1_36A2, Fusobacterium nucleatum subsp. vincentii 3_1_36A2, Fusobacterium sp. 3_1_36A2
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