Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEU33089.1DctP family TRAP transporter solute receptor. (327 aa)    
Predicted Functional Partners:
EEU33090.1
TRAP transporter, DctM subunit.
  
 0.970
EEU32638.1
Hypothetical protein.
  
  
 
0.927
EEU33282.1
DctP family TRAP transporter solute receptor.
  
  
 
0.926
EEU33280.1
TRAP transporter, DctM subunit.
  
 0.914
EEU32636.1
TRAP transporter, DctM subunit.
  
 0.817
EEU33281.1
Hypothetical protein.
 
  
 0.736
EEU33088.1
Hypothetical protein.
       0.721
EEU33091.1
Hypothetical protein.
     
 0.700
EEU33087.1
Cyclically-permuted mutarotase.
     
 0.676
nanA
N-acetylneuraminate lyase; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate.
     
 0.655
Your Current Organism:
Fusobacterium nucleatum vincentii
NCBI taxonomy Id: 469604
Other names: F. nucleatum subsp. vincentii 3_1_36A2, Fusobacterium nucleatum subsp. vincentii 3_1_36A2, Fusobacterium sp. 3_1_36A2
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