Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEU31735.1Hypothetical protein. (270 aa)    
Predicted Functional Partners:
EEU31734.1
Hypothetical protein.
     0.896
EEU31736.1
Hypothetical protein.
 
     0.845
EEU31732.1
Hypothetical protein.
 
     0.783
EEU31798.1
Hypothetical protein; Belongs to the sulfur carrier protein TusA family.
  
 0.767
EEU31731.1
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.720
EEU31733.1
Hypothetical protein.
       0.717
EEU32267.1
Hypothetical protein.
 
 0.655
EEU31737.1
3-oxoacyl-[acyl-carrier-protein] synthase 3.
 
    0.548
AGU16128.1
Hypothetical protein.
  
    0.513
rph
Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
  
  
 0.463
Your Current Organism:
Fusobacterium nucleatum vincentii
NCBI taxonomy Id: 469604
Other names: F. nucleatum subsp. vincentii 3_1_36A2, Fusobacterium nucleatum subsp. vincentii 3_1_36A2, Fusobacterium sp. 3_1_36A2
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