Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEU31841.1Hypothetical protein. (292 aa)    
Predicted Functional Partners:
EEU31840.1
Hypothetical protein.
 
     0.943
EEU31842.1
Hypothetical protein.
 
     0.938
EEU31838.1
DNA phosphorothioation system restriction enzyme.
 
     0.916
EEU31836.1
DNA sulfur modification protein DndD.
 
     0.898
EEU31839.1
Cysteine desulfurase.
 
     0.897
EEU33045.2
Hypothetical protein.
 
     0.774
EEU31835.2
Hypothetical protein.
       0.635
EEU31837.1
Hypothetical protein.
       0.583
EEU32422.1
Hypothetical protein.
  
     0.440
Your Current Organism:
Fusobacterium nucleatum vincentii
NCBI taxonomy Id: 469604
Other names: F. nucleatum subsp. vincentii 3_1_36A2, Fusobacterium nucleatum subsp. vincentii 3_1_36A2, Fusobacterium sp. 3_1_36A2
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