Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEU31391.1Propanediol utilization protein PduA. (94 aa)    
Predicted Functional Partners:
EEU31387.1
Hypothetical protein.
 
 
 
 0.963
EEU31400.1
Hypothetical protein.
 
  
 0.734
EEU31393.1
Hypothetical protein.
  
  
 0.729
EEU31392.1
Hypothetical protein.
 
    
0.702
EEU31399.1
Ethanolamine utilization protein, EutP; Belongs to the EutP/PduV family.
 
  
 0.693
EEU31239.1
Ethanolamine utilization protein EutJ family protein.
 
   
 0.609
EEU31390.1
Acetaldehyde dehydrogenase (acetylating).
 
   
 0.509
eutC
Ethanolamine ammonia-lyase light chain; Belongs to the EutC family.
  
  
 0.487
EEU32690.1
ATP:cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
  
  
 0.475
EEU31395.1
Hypothetical protein.
     
 0.455
Your Current Organism:
Fusobacterium nucleatum vincentii
NCBI taxonomy Id: 469604
Other names: F. nucleatum subsp. vincentii 3_1_36A2, Fusobacterium nucleatum subsp. vincentii 3_1_36A2, Fusobacterium sp. 3_1_36A2
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