Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEU31337.1Hypothetical protein. (230 aa)    
Predicted Functional Partners:
EEU32234.1
Hypothetical protein.
 
 0.985
EEU31338.1
Hypothetical protein.
 
   0.973
EEU31339.1
Hypothetical protein.
 
   0.971
EEU31340.1
Hypothetical protein.
 
    0.944
EEU31334.1
Hypothetical protein.
 
   0.910
EEU31336.1
Hypothetical protein.
 
     0.838
EEU32631.2
FTR1 family protein.
 
     0.751
EEU32632.1
Hypothetical protein.
 
     0.738
EEU32466.1
Hypothetical protein.
 
     
0.702
EEU32041.1
LolC/E family lipoprotein releasing system, transmembrane protein.
  
   0.629
Your Current Organism:
Fusobacterium nucleatum vincentii
NCBI taxonomy Id: 469604
Other names: F. nucleatum subsp. vincentii 3_1_36A2, Fusobacterium nucleatum subsp. vincentii 3_1_36A2, Fusobacterium sp. 3_1_36A2
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