Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGU16172.1Hypothetical protein. (165 aa)    
Predicted Functional Partners:
AGU16173.1
Hypothetical protein.
 
     0.843
EEU32664.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
   0.812
EEU32180.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
   0.763
EEU33270.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
   0.763
EEU32665.1
Hypothetical protein.
  
   0.762
EEU33271.1
Hypothetical protein.
  
   0.633
EEU32178.1
Hypothetical protein.
  
   0.589
ecfA-2
Cobalt import ATP-binding protein CbiO 2; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
     0.530
EEU32933.1
Hypothetical protein; Belongs to the ABC transporter superfamily.
 
    
0.504
EEU32935.1
Hypothetical protein.
       0.492
Your Current Organism:
Fusobacterium nucleatum vincentii
NCBI taxonomy Id: 469604
Other names: F. nucleatum subsp. vincentii 3_1_36A2, Fusobacterium nucleatum subsp. vincentii 3_1_36A2, Fusobacterium sp. 3_1_36A2
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