STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mucDSerine protease MucD; Belongs to the peptidase S1C family. (481 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.822
EFL81928.1
Response regulator receiver domain protein.
  
  
 0.754
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
    
 0.662
ilvB
Acetolactate synthase, large subunit, biosynthetic type.
     
 0.661
EFL84045.1
enoyl-CoA hydratase/isomerase family protein.
    
 0.656
EFL82980.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein.
 
  
 0.649
EFL82475.1
Tat pathway signal sequence domain protein.
     
 0.631
qseB
Transcriptional regulatory protein QseB.
  
  
 0.615
EFL82878.1
ATPase, AAA family.
    
 0.600
EFL84089.1
Peptidase, S41 family; Belongs to the peptidase S41A family.
 
  
 0.597
Your Current Organism:
Burkholderiales bacterium 1147
NCBI taxonomy Id: 469610
Other names: B. bacterium 1_1_47, Burkholderiales bacterium 1_1_47
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