STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL83232.1Amidase, hydantoinase/carbamoylase family. (426 aa)    
Predicted Functional Partners:
EFL83353.1
Amidohydrolase family protein.
 
 
 0.882
argA
Amino-acid N-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily.
 
 
 0.732
pyrD
Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.705
gltD
Glutamate synthase subunit beta.
  
 
 0.674
EFL84103.1
FAD binding domain protein.
   
 0.666
EFL82468.1
2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family.
  
 
  0.638
EFL83880.1
4Fe-4S binding domain protein.
    
  0.630
narL
Nitrate/nitrite response regulator protein NarL.
       0.526
EFL83231.1
Histidine kinase.
       0.526
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
  
 0.501
Your Current Organism:
Burkholderiales bacterium 1147
NCBI taxonomy Id: 469610
Other names: B. bacterium 1_1_47, Burkholderiales bacterium 1_1_47
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