STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
traCtype-IV secretion system protein TraC. (903 aa)    
Predicted Functional Partners:
EFL82238.1
Type IV secretory pathway, VirB3-like protein.
  
 
 0.929
EFL82230.1
VirB8 protein.
  
 
 0.925
EFL83814.1
TraU protein.
 
   
 0.908
EFL83815.1
Putative type-F conjugative transfer system protein TraW.
 
   
 0.888
EFL82228.1
Bacterial conjugation TrbI-like protein.
 
 
 0.883
EFL82229.1
Putative P-type conjugative transfer protein VirB9.
 
 
 0.882
EFL83816.1
Hypothetical protein.
 
   
 0.868
EFL83821.1
Hypothetical protein.
 
   
 0.855
EFL82235.1
TrbL/VirB6 plasmid conjugal transfer protein.
  
 
 0.845
EFL83811.1
Mating pair stabilisation protein TraN.
 
   
 0.786
Your Current Organism:
Burkholderiales bacterium 1147
NCBI taxonomy Id: 469610
Other names: B. bacterium 1_1_47, Burkholderiales bacterium 1_1_47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.