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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
traDConjugative coupling factor TraD, SXT/TOL subfamily. (625 aa)    
Predicted Functional Partners:
EFL83824.1
TraB pilus assembly protein.
 
     0.851
EFL83829.1
Transglycosylase SLT domain protein.
 
   
 0.848
EFL83809.1
TraH protein.
 
   
 0.780
traC
type-IV secretion system protein TraC.
 
  
 0.776
EFL83830.1
Hypothetical protein.
       0.773
EFL83832.1
Hypothetical protein.
       0.773
EFL83814.1
TraU protein.
 
     0.769
EFL83810.1
Hypothetical protein.
 
     0.763
EFL83811.1
Mating pair stabilisation protein TraN.
 
  
 0.755
EFL83821.1
Hypothetical protein.
 
     0.744
Your Current Organism:
Burkholderiales bacterium 1147
NCBI taxonomy Id: 469610
Other names: B. bacterium 1_1_47, Burkholderiales bacterium 1_1_47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.