STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL83857.1Hypothetical protein. (254 aa)    
Predicted Functional Partners:
hgdC
(R)-2-hydroxyglutaryl-CoA dehydratase activator.
 
     0.833
EFL83858.1
Hypothetical protein.
       0.757
EFL83860.1
2-hydroxyglutaryl-CoA dehydratase, D-component.
 
     0.744
EFL83861.1
2-hydroxyglutaryl-CoA dehydratase, D-component.
 
     0.721
EFL83862.1
Gram-negative porin.
       0.400
Your Current Organism:
Burkholderiales bacterium 1147
NCBI taxonomy Id: 469610
Other names: B. bacterium 1_1_47, Burkholderiales bacterium 1_1_47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.