STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL83882.1Putative ferredoxin-type protein NapF. (198 aa)    
Predicted Functional Partners:
EFL82330.1
Pyridine nucleotide-disulfide oxidoreductase.
  
 0.984
EFL83881.1
4Fe-4S binding domain protein.
  
 0.960
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.942
EFL83880.1
4Fe-4S binding domain protein.
 
 
 0.875
EFL83337.1
Putative CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase.
  
 0.867
EFL83228.1
Putative ferredoxin-type protein NapH.
 
 
 0.860
EFL82868.1
Peptidase M16 inactive domain protein; Belongs to the peptidase M16 family.
  
 
 0.853
napA
Periplasmic nitrate reductase, large subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
 
 
 0.808
EFL84103.1
FAD binding domain protein.
   
 0.761
frdB
Fumarate reductase iron-sulfur subunit.
   
 
 0.740
Your Current Organism:
Burkholderiales bacterium 1147
NCBI taxonomy Id: 469610
Other names: B. bacterium 1_1_47, Burkholderiales bacterium 1_1_47
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