Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL83425.1 | EFL83426.1 | HMPREF0189_00503 | HMPREF0189_00504 | Reverse transcriptase (RNA-dependent DNA polymerase). | Group II intron, maturase-specific domain protein. | 0.990 |
EFL83425.1 | EFL83909.1 | HMPREF0189_00503 | HMPREF0189_00988 | Reverse transcriptase (RNA-dependent DNA polymerase). | Hypothetical protein. | 0.768 |
EFL83425.1 | EFL84013.1 | HMPREF0189_00503 | HMPREF0189_01376 | Reverse transcriptase (RNA-dependent DNA polymerase). | Putative 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.407 |
EFL83426.1 | EFL83425.1 | HMPREF0189_00504 | HMPREF0189_00503 | Group II intron, maturase-specific domain protein. | Reverse transcriptase (RNA-dependent DNA polymerase). | 0.990 |
EFL83426.1 | EFL83909.1 | HMPREF0189_00504 | HMPREF0189_00988 | Group II intron, maturase-specific domain protein. | Hypothetical protein. | 0.764 |
EFL83426.1 | EFL84013.1 | HMPREF0189_00504 | HMPREF0189_01376 | Group II intron, maturase-specific domain protein. | Putative 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.407 |
EFL83909.1 | EFL83425.1 | HMPREF0189_00988 | HMPREF0189_00503 | Hypothetical protein. | Reverse transcriptase (RNA-dependent DNA polymerase). | 0.768 |
EFL83909.1 | EFL83426.1 | HMPREF0189_00988 | HMPREF0189_00504 | Hypothetical protein. | Group II intron, maturase-specific domain protein. | 0.764 |
EFL83909.1 | EFL84013.1 | HMPREF0189_00988 | HMPREF0189_01376 | Hypothetical protein. | Putative 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.407 |
EFL84013.1 | EFL83425.1 | HMPREF0189_01376 | HMPREF0189_00503 | Putative 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | Reverse transcriptase (RNA-dependent DNA polymerase). | 0.407 |
EFL84013.1 | EFL83426.1 | HMPREF0189_01376 | HMPREF0189_00504 | Putative 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | Group II intron, maturase-specific domain protein. | 0.407 |
EFL84013.1 | EFL83909.1 | HMPREF0189_01376 | HMPREF0189_00988 | Putative 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | Hypothetical protein. | 0.407 |